Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DUSP12Dual specificity phosphatase 12. (313 aa)    
Predicted Functional Partners:
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
     
 0.651
XYLB
Xylulokinase.
   
   0.649
EIF5
Eukaryotic translation initiation factor 5.
   
   0.613
BARD1
BRCA1 associated RING domain 1.
   
 0.590
OLFML2B
Olfactomedin-like domain-containing protein.
      
 0.565
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
   
 
 0.536
FOSB
FosB proto-oncogene, AP-1 transcription factor subunit.
   
 
 0.516
CCNH
Cyclin H; Belongs to the cyclin family.
    
   0.514
LIN28B
Lin-28 homolog B.
    
 
 0.511
HACE1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.504
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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