Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMIZ1Zinc finger MIZ-type containing 1. (933 aa)    
Predicted Functional Partners:
ZMIZ2
Zinc finger MIZ-type containing 2.
   
    0.807
AR
Androgen receptor.
   
 0.793
SUMO1
Ubiquitin-like domain-containing protein.
    
 0.652
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.603
KCTD2
Potassium channel tetramerization domain containing 2.
    
 0.601
NANOG
Homeobox domain-containing protein.
   
   0.594
SIRT1
Deacetylase sirtuin-type domain-containing protein.
    
 
 0.591
FSIP2
Uncharacterized protein.
    
 0.540
ENSMODP00000041433
Ubiquitin-like domain-containing protein.
   
 0.534
SUMO2
Ubiquitin-like domain-containing protein.
    
 0.524
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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