STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMO1Vitelline membrane outer layer 1 homolog. (207 aa)    
Predicted Functional Partners:
TMEM200A
Transmembrane protein 200A.
      
 0.583
EFHC1
EF-hand domain containing 1.
    
 
 0.527
STYXL1
Uncharacterized protein.
    
 
 0.424
EFHC2
EF-hand domain containing 2.
    
 
 0.423
RPL4
Ribosomal protein L4.
    
 
 0.422
LINGO2
Leucine rich repeat and Ig domain containing 2.
    
 0.422
NEK11
NIMA related kinase 11.
     
 0.412
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
    
 
 0.412
TMEM252
Transmembrane protein 252.
      
 0.403
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.