DHPS protein (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHPS	DOHH	ENSMODP00000008426	ENSMODP00000008587	Uncharacterized protein.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.929
DHPS	EIF5A	ENSMODP00000008426	ENSMODP00000008248	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.873
DHPS	EIF5A2	ENSMODP00000008426	ENSMODP00000020010	Uncharacterized protein.	eIF-5a domain-containing protein.	0.968
DHPS	IPO13	ENSMODP00000008426	ENSMODP00000003664	Uncharacterized protein.	Importin 13.	0.602
DHPS	IPO5	ENSMODP00000008426	ENSMODP00000052302	Uncharacterized protein.	Importin 5.	0.620
DHPS	IPO9	ENSMODP00000008426	ENSMODP00000000574	Uncharacterized protein.	Importin 9.	0.575
DHPS	KPNB1	ENSMODP00000008426	ENSMODP00000052995	Uncharacterized protein.	Karyopherin subunit beta 1.	0.590
DHPS	LOC100028564	ENSMODP00000008426	ENSMODP00000022472	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.873
DHPS	RPL9	ENSMODP00000008426	ENSMODP00000025713	Uncharacterized protein.	Ribosomal protein L9.	0.761
DHPS	TNPO3	ENSMODP00000008426	ENSMODP00000018378	Uncharacterized protein.	Transportin 3.	0.610
DOHH	DHPS	ENSMODP00000008587	ENSMODP00000008426	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Uncharacterized protein.	0.929
DOHH	EIF5A	ENSMODP00000008587	ENSMODP00000008248	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Eukaryotic translation initiation factor 5A.	0.955
DOHH	EIF5A2	ENSMODP00000008587	ENSMODP00000020010	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	eIF-5a domain-containing protein.	0.993
DOHH	LOC100028564	ENSMODP00000008587	ENSMODP00000022472	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Eukaryotic translation initiation factor 5A.	0.955
EIF5A	DHPS	ENSMODP00000008248	ENSMODP00000008426	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.873
EIF5A	DOHH	ENSMODP00000008248	ENSMODP00000008587	Eukaryotic translation initiation factor 5A.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.955
EIF5A	EIF5A2	ENSMODP00000008248	ENSMODP00000020010	Eukaryotic translation initiation factor 5A.	eIF-5a domain-containing protein.	0.922
EIF5A	IPO13	ENSMODP00000008248	ENSMODP00000003664	Eukaryotic translation initiation factor 5A.	Importin 13.	0.409
EIF5A	RPL9	ENSMODP00000008248	ENSMODP00000025713	Eukaryotic translation initiation factor 5A.	Ribosomal protein L9.	0.893
EIF5A2	DHPS	ENSMODP00000020010	ENSMODP00000008426	eIF-5a domain-containing protein.	Uncharacterized protein.	0.968