STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALOXE3Arachidonate lipoxygenase 3. (711 aa)    
Predicted Functional Partners:
NIPAL4
NIPA like domain containing 4.
      
 0.596
TGM1
Transglutaminase 1.
   
 0.567
ABHD5
Abhydrolase domain containing 5.
      
 0.538
CCDC190
Uncharacterized protein.
      
 0.491
KLHDC9
Kelch domain containing 9.
      
 0.491
PSORS1C2
Psoriasis susceptibility 1 candidate 2.
   
  
 0.490
ALOX15
Uncharacterized protein.
  
  
 
0.478
RNASEK
Uncharacterized protein.
      
 0.459
LIPN
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
  
 0.445
TEP1
Telomerase associated protein 1.
    
 0.419
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.