STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM25RNA binding motif protein 25. (850 aa)    
Predicted Functional Partners:
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 
 0.992
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.984
U2AF2
Uncharacterized protein.
   
 
 0.978
SF3B3
Splicing factor 3b subunit 3.
    
 
 0.968
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.962
DDX46
DEAD-box helicase 46.
   
 0.957
PRPF39
Pre-mRNA processing factor 39.
   
 
 0.952
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 0.944
PRRC2C
Proline rich coiled-coil 2C.
   
    0.942
F6Q9X6_MONDO
Uncharacterized protein.
   
 0.916
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.