STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOSD1Josephin domain containing 1. (200 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.739
F7FV67_MONDO
Ubiquitin-like domain-containing protein.
   
 0.739
ENSMODP00000043793
Ubiquitin-like domain-containing protein.
   
 0.739
CMBL
Carboxymethylenebutenolidase homolog.
      
 0.714
KCNIP3
Potassium voltage-gated channel interacting protein 3.
   
  
 0.714
SLC16A14
Solute carrier family 16 member 14.
      
 0.700
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.699
ENSMODP00000044759
Ubiquitin-like domain-containing protein.
    
  0.699
LOC100619355
Ubiquitin-like domain-containing protein.
    
  0.699
LOC100021198
Uncharacterized protein.
   
 0.672
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.