STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA8Integrin subunit alpha 8; Belongs to the integrin alpha chain family. (1063 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.983
VTN
SMB domain-containing protein.
   
 0.971
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.947
TNR
Tenascin R.
    
 0.941
FN1
Fibronectin 1.
    
 0.929
NPNT
Nephronectin.
    
 0.919
FREM2
FRAS1 related extracellular matrix 2.
   
 0.914
ACTN4
Actinin alpha 4.
   
 
 0.913
FRAS1
Uncharacterized protein.
   
 
 0.912
TNXB
Tenascin XB.
    
 0.911
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.