STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD27Ankyrin repeat domain 27. (1063 aa)    
Predicted Functional Partners:
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.922
RAB32
Uncharacterized protein.
    
 
 0.910
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.861
RAB21
RAB21, member RAS oncogene family.
   
 0.805
ENSMODP00000049845
V-SNARE coiled-coil homology domain-containing protein.
    
 0.795
RAB38
Uncharacterized protein.
    
 
 0.777
ENSMODP00000049256
Rab5-bind domain-containing protein.
   
 0.742
RABEP2
Rabaptin domain-containing protein.
   
 0.742
RABEP1
Rabaptin domain-containing protein.
   
 0.742
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.580
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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