Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX55 | FTSJ3 | ENSMODP00000049946 | ENSMODP00000012395 | RNA helicase. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.984 |
DDX55 | LOC100027300 | ENSMODP00000049946 | ENSMODP00000026359 | RNA helicase. | WD_REPEATS_REGION domain-containing protein. | 0.706 |
DDX55 | RCL1 | ENSMODP00000049946 | ENSMODP00000044432 | RNA helicase. | RNA terminal phosphate cyclase like 1. | 0.483 |
DDX55 | TRMT6 | ENSMODP00000049946 | ENSMODP00000004632 | RNA helicase. | tRNA methyltransferase 6. | 0.486 |
DDX55 | TRMT61A | ENSMODP00000049946 | ENSMODP00000016899 | RNA helicase. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.810 |
DDX55 | TRMT61B | ENSMODP00000049946 | ENSMODP00000039520 | RNA helicase. | Uncharacterized protein. | 0.679 |
DDX55 | TSR1 | ENSMODP00000049946 | ENSMODP00000028699 | RNA helicase. | TSR1 ribosome maturation factor. | 0.580 |
FTSJ3 | DDX55 | ENSMODP00000012395 | ENSMODP00000049946 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | RNA helicase. | 0.984 |
FTSJ3 | LOC100027300 | ENSMODP00000012395 | ENSMODP00000026359 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.909 |
FTSJ3 | METTL1 | ENSMODP00000012395 | ENSMODP00000026681 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.864 |
FTSJ3 | RCL1 | ENSMODP00000012395 | ENSMODP00000044432 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | RNA terminal phosphate cyclase like 1. | 0.656 |
FTSJ3 | TRMT11 | ENSMODP00000012395 | ENSMODP00000022044 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA methyltransferase 11 homolog. | 0.648 |
FTSJ3 | TRMT6 | ENSMODP00000012395 | ENSMODP00000004632 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA methyltransferase 6. | 0.904 |
FTSJ3 | TRMT61A | ENSMODP00000012395 | ENSMODP00000016899 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.846 |
FTSJ3 | TRMT61B | ENSMODP00000012395 | ENSMODP00000039520 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein. | 0.759 |
FTSJ3 | TSR1 | ENSMODP00000012395 | ENSMODP00000028699 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | TSR1 ribosome maturation factor. | 0.910 |
FTSJ3 | WDR4 | ENSMODP00000012395 | ENSMODP00000026292 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.788 |
LOC100027300 | DDX55 | ENSMODP00000026359 | ENSMODP00000049946 | WD_REPEATS_REGION domain-containing protein. | RNA helicase. | 0.706 |
LOC100027300 | FTSJ3 | ENSMODP00000026359 | ENSMODP00000012395 | WD_REPEATS_REGION domain-containing protein. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.909 |
LOC100027300 | METTL1 | ENSMODP00000026359 | ENSMODP00000026681 | WD_REPEATS_REGION domain-containing protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.406 |
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