STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBMYB proto-oncogene, transcription factor; V-myb avian myeloblastosis viral oncogene homolog (761 aa)    
Predicted Functional Partners:
CREBBP
CREB binding protein
    
 0.987
EP300
E1A binding protein p300
    
 0.949
CEBPB
CCAAT/enhancer binding protein (C/EBP), beta
    
 
 0.895
KMT2A
Histone-lysine N-methyltransferase; Histone methyltransferase
    
 
 0.880
GATA1
GATA binding protein 1 (globin transcription factor 1)
   
 
 0.792
LMO2
Uncharacterized protein; LIM domain only 2 (rhombotin-like 1)
   
 
 0.735
SPI1
Spi-1 proto-oncogene
      
 0.719
RUNX1
Runt-related transcription factor; CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters
   
  
 0.715
LIN52
Lin-52 DREAM MuvB core complex component
    
 
 0.714
LIN37
Lin-37 DREAM MuvB core complex component
    
 
 0.704
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: M. domestica, Monodelphis domestica, gray short-tailed opossum
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