STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDHBL-lactate dehydrogenase B chain; Belongs to the LDH/MDH superfamily. LDH family. (378 aa)    
Predicted Functional Partners:
GOT2
Aspartate aminotransferase.
   
 0.976
GOT1
Aspartate aminotransferase.
   
 0.974
PKLR
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.952
PKM
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.951
PC
Pyruvate carboxylase.
   
 0.948
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.943
LDHD
Lactate dehydrogenase D.
   
 
 0.932
ME2
Malic enzyme.
  
 0.931
F7EDE1_MONDO
Malic enzyme.
  
 0.931
ME1
Malic enzyme.
  
 0.931
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.