STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC1AC-type lectin domain family 1 member A. (270 aa)    
Predicted Functional Partners:
CLEC4E
C-type lectin domain family 4 member E.
   
 
 0.828
PRDM2
PR/SET domain 2.
    
 0.743
CILP2
Cartilage intermediate layer protein 2.
      
 0.678
CD72
Uncharacterized protein.
      
 0.634
SYK
Tyrosine-protein kinase.
   
 0.535
PGLYRP1
Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity.
   
  
 0.516
LCP2
SH2 domain-containing protein.
   
 0.474
OIT3
Oncoprotein induced transcript 3.
   
 0.438
F6U8L7_MONDO
Uncharacterized protein.
   
 0.438
ZAP70
Tyrosine-protein kinase.
   
 0.432
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.