MMUT protein (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLY	MMUT	ENSMODP00000018423	ENSMODP00000023527	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Methylmalonyl-CoA mutase.	0.881
ACLY	PC	ENSMODP00000018423	ENSMODP00000009736	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Pyruvate carboxylase.	0.930
ACLY	PCK1	ENSMODP00000018423	ENSMODP00000020614	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Phosphoenolpyruvate carboxykinase 1.	0.897
ACLY	PCK2	ENSMODP00000018423	ENSMODP00000052312	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Phosphoenolpyruvate carboxykinase 2, mitochondrial.	0.887
ACLY	SUCLA2	ENSMODP00000018423	ENSMODP00000014058	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.440
ACLY	SUCLG1	ENSMODP00000018423	ENSMODP00000027982	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	0.929
ACSF3	MCEE	ENSMODP00000004721	ENSMODP00000054750	Acyl-CoA synthetase family member 3.	Methylmalonyl-CoA epimerase.	0.902
ACSF3	MMAA	ENSMODP00000004721	ENSMODP00000000606	Acyl-CoA synthetase family member 3.	Metabolism of cobalamin associated A.	0.601
ACSF3	MMUT	ENSMODP00000004721	ENSMODP00000023527	Acyl-CoA synthetase family member 3.	Methylmalonyl-CoA mutase.	0.874
MCEE	ACSF3	ENSMODP00000054750	ENSMODP00000004721	Methylmalonyl-CoA epimerase.	Acyl-CoA synthetase family member 3.	0.902
MCEE	MMAA	ENSMODP00000054750	ENSMODP00000000606	Methylmalonyl-CoA epimerase.	Metabolism of cobalamin associated A.	0.840
MCEE	MMUT	ENSMODP00000054750	ENSMODP00000023527	Methylmalonyl-CoA epimerase.	Methylmalonyl-CoA mutase.	0.972
MCEE	SUCLA2	ENSMODP00000054750	ENSMODP00000014058	Methylmalonyl-CoA epimerase.	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.486
MCEE	SUCLG1	ENSMODP00000054750	ENSMODP00000027982	Methylmalonyl-CoA epimerase.	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	0.571
MMAA	ACSF3	ENSMODP00000000606	ENSMODP00000004721	Metabolism of cobalamin associated A.	Acyl-CoA synthetase family member 3.	0.601
MMAA	MCEE	ENSMODP00000000606	ENSMODP00000054750	Metabolism of cobalamin associated A.	Methylmalonyl-CoA epimerase.	0.840
MMAA	MMUT	ENSMODP00000000606	ENSMODP00000023527	Metabolism of cobalamin associated A.	Methylmalonyl-CoA mutase.	0.996
MMUT	ACLY	ENSMODP00000023527	ENSMODP00000018423	Methylmalonyl-CoA mutase.	ATP-citrate synthase; Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate for de novo cholesterol and fatty acid synthesis; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family.	0.881
MMUT	ACSF3	ENSMODP00000023527	ENSMODP00000004721	Methylmalonyl-CoA mutase.	Acyl-CoA synthetase family member 3.	0.874
MMUT	MCEE	ENSMODP00000023527	ENSMODP00000054750	Methylmalonyl-CoA mutase.	Methylmalonyl-CoA epimerase.	0.972