STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF2CMyocyte enhancer factor 2C. (483 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
    
 
 0.864
MAPK14
Mitogen-activated protein kinase.
   
 0.794
PTK2
Uncharacterized protein.
   
 
 0.782
ENSMODP00000059161
FERM domain-containing protein.
   
 
 0.782
MYOG
Myogenin.
    
 0.745
MAPK12
Mitogen-activated protein kinase.
   
 0.702
CTNNB1
Catenin beta 1.
   
 
 0.701
MAPK13
Mitogen-activated protein kinase.
   
 0.697
MYOD1
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
    
 0.678
GATA4
GATA binding protein 4.
   
 
 0.675
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.