F7DQB2_MONDO protein (Monodelphis domestica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F7DQB2_MONDO

Uncharacterized protein. (1505 aa)

Predicted Functional Partners:

EIF4E

0.934

EIF4E1B

0.861

F6VMH3_MONDO

0.861

EIF4E3

0.844

NCBP1

0.804

EIF4H

0.775

EIF4A1

0.742

ENSMODP00000044175

0.742

EIF3A

0.726

ENSMODP00000057056

0.711

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF3A	EIF4A1	ENSMODP00000058505	ENSMODP00000008799	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.853
EIF3A	EIF4E	ENSMODP00000058505	ENSMODP00000025914	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.421
EIF3A	EIF4E1B	ENSMODP00000058505	ENSMODP00000006273	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.402
EIF3A	EIF4H	ENSMODP00000058505	ENSMODP00000052336	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Eukaryotic translation initiation factor 4H.	0.866
EIF3A	ENSMODP00000044175	ENSMODP00000058505	ENSMODP00000044175	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein.	0.853
EIF3A	ENSMODP00000057056	ENSMODP00000058505	ENSMODP00000057056	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.402
EIF3A	F6VMH3_MONDO	ENSMODP00000058505	ENSMODP00000021132	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.402
EIF3A	F7DQB2_MONDO	ENSMODP00000058505	ENSMODP00000032477	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	Uncharacterized protein.	0.726
EIF4A1	EIF3A	ENSMODP00000008799	ENSMODP00000058505	Uncharacterized protein; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	0.853
EIF4A1	EIF4E	ENSMODP00000008799	ENSMODP00000025914	Uncharacterized protein; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.855
EIF4A1	EIF4E1B	ENSMODP00000008799	ENSMODP00000006273	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.662
EIF4A1	EIF4E3	ENSMODP00000008799	ENSMODP00000004776	Uncharacterized protein; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4E family member 3; Belongs to the eukaryotic initiation factor 4E family.	0.683
EIF4A1	EIF4H	ENSMODP00000008799	ENSMODP00000052336	Uncharacterized protein; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4H.	0.848
EIF4A1	ENSMODP00000057056	ENSMODP00000008799	ENSMODP00000057056	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.662
EIF4A1	F6VMH3_MONDO	ENSMODP00000008799	ENSMODP00000021132	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.662
EIF4A1	F7DQB2_MONDO	ENSMODP00000008799	ENSMODP00000032477	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.742
EIF4A1	NCBP1	ENSMODP00000008799	ENSMODP00000050621	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear cap binding protein subunit 1.	0.567
EIF4E	EIF3A	ENSMODP00000025914	ENSMODP00000058505	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	0.421
EIF4E	EIF4A1	ENSMODP00000025914	ENSMODP00000008799	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.855
EIF4E	EIF4E1B	ENSMODP00000025914	ENSMODP00000006273	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.614