STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXC1Fork-head domain-containing protein. (212 aa)    
Predicted Functional Partners:
HOXA5
Homeobox A5.
    
 0.711
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
  
 0.665
NFATC2
Nuclear factor of activated T cells 2.
   
 
 0.661
GATA2
GATA binding protein 2.
    
 0.649
NFATC1
Nuclear factor of activated T cells 1.
   
 
 0.574
GATA3
GATA binding protein 3.
    
 0.490
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
    
 
 0.488
ANGPTL7
Angiopoietin like 7.
    
 0.468
SLC6A2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.466
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
  
 0.455
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.