STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTUB bipartite transcription factor; Belongs to the TUB family. (549 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
   
 0.646
IFT140
Intraflagellar transport 140.
    
 0.633
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.627
WDR19
WD repeat domain 19.
    
 0.604
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
    
 0.582
F7BBU1_MONDO
WD_REPEATS_REGION domain-containing protein.
    
 0.517
GPR161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.506
TTC21A
Tetratricopeptide repeat domain 21A.
    
 0.493
TXNDC9
Thioredoxin domain containing 9.
    
 
 0.468
KCNE4
Potassium voltage-gated channel subfamily E regulatory subunit 4.
      
 0.456
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.