STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (405 aa)    
Predicted Functional Partners:
SEC63
J domain-containing protein.
   
 0.997
SEC61G
SEC61 translocon gamma subunit.
    
 
 0.987
ENSMODP00000045724
J domain-containing protein.
   
 
 0.972
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.959
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.917
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.917
OXSR1
Protein kinase domain-containing protein.
    
 
 0.913
STK39
Serine/threonine kinase 39.
    
 
 0.913
STRADB
STE20 related adaptor beta.
    
 
 0.808
STRADA
STE20 related adaptor alpha.
    
 
 0.808
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.