STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCCSCytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (269 aa)    
Predicted Functional Partners:
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.973
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.916
HMOX2
Heme oxygenase 2.
     
 0.904
HMOX1
Uncharacterized protein.
     
 0.901
CYC1
Cytochrome c1.
   
 
 0.777
ARHGAP6
Rho GTPase activating protein 6.
      
 0.744
MRPL35
Mitochondrial ribosomal protein L35.
   
  
 0.683
ARHGAP36
Rho-GAP domain-containing protein.
      
 0.651
REXO4
REX4 homolog, 3'-5' exonuclease.
      
 0.640
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.607
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.