STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL4BUbiquitin-like protein 4B. (219 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.960
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.938
NBR1
NBR1 autophagy cargo receptor.
   
 0.874
UBXN7
UBX domain-containing protein 7.
    
 0.864
TRAF7
TNF receptor associated factor 7.
   
 0.850
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.817
ENSMODP00000047672
HECT domain-containing protein.
   
 0.815
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.815
BAG6
BCL2 associated athanogene 6.
    
 0.790
RPS18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.783
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.