STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT1Uncharacterized protein. (4500 aa)    
Predicted Functional Partners:
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.641
NPHS1
NPHS1 adhesion molecule, nephrin.
   
  
 0.621
CTNNB1
Catenin beta 1.
    
 
 0.611
KIRREL1
Kirre like nephrin family adhesion molecule 1.
   
 
 0.596
FJX1
Four-jointed box kinase 1.
   
 
 0.588
SLC36A4
Solute carrier family 36 member 4.
      
 0.568
FAT4
FAT atypical cadherin 4.
  
0.503
AXIN1
Axin 1.
      
 0.491
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
      
 0.487
ATN1
Atrophin 1.
    
 0.481
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.