STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSI2Musashi RNA binding protein 2. (215 aa)    
Predicted Functional Partners:
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.825
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.687
TNPO1
Transportin 1.
   
 
 0.562
TNPO2
Transportin 2.
   
 
 0.562
CSTF3
Suf domain-containing protein.
   
 
 0.426
F7BFS8_MONDO
Suf domain-containing protein.
   
 
 0.426
PCF11
PCF11 cleavage and polyadenylation factor subunit.
      
 0.403
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.401
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.401
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.401
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.