STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY22_00815ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)    
Predicted Functional Partners:
GY22_00820
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
GY22_00825
Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
GY22_01110
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
GY22_03830
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.969
GY22_00290
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.954
GY22_01115
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.951
GY22_00295
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
GY22_13910
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
GY22_01120
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.921
GY22_00830
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.