STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY22_00970Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
GY22_09995
Deoxyribose-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.596
GY22_00975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.588
GY22_00965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
GY22_15155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
GY22_12765
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.476
GY22_05825
Gamma-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.445
GY22_00985
Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.434
GY22_07960
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
GY22_00980
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.421
GY22_09740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.