Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GY22_02015RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (945 aa)    
Predicted Functional Partners:
tatC
Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
       0.671
whiB-2
WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.604
GY22_02010
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
GY22_02040
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.570
GY22_02685
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.565
arc
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.556
GY22_03620
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
whiB
Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.537
GY22_02005
Dolichol-phosphate mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.534
GY22_02045
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.498
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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