sigA protein (Kocuria polaris) - STRING interaction network

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Score

sigA

RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (498 aa)

Predicted Functional Partners:

rpoB

0.987

rpoC

0.983

rpoA

0.982

rbpA

0.955

GY22_08745

0.942

GY22_01755

0.934

whiA

0.882

dnaG

0.861

whiB-2

0.847

GY22_02035

0.846

Your Current Organism:

Kocuria polaris

NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GY22_01755	GY22_08745	GY22_01755	GY22_08745	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
GY22_01755	rbpA	GY22_01755	GY22_16530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.876
GY22_01755	rpoA	GY22_01755	GY22_05635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.928
GY22_01755	rpoB	GY22_01755	GY22_05865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.932
GY22_01755	rpoC	GY22_01755	GY22_05860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.928
GY22_01755	sigA	GY22_01755	GY22_03335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.934
GY22_02035	rbpA	GY22_02035	GY22_16530	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.781
GY22_02035	rpoA	GY22_02035	GY22_05635	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.786
GY22_02035	rpoB	GY22_02035	GY22_05865	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.864
GY22_02035	rpoC	GY22_02035	GY22_05860	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.823
GY22_02035	sigA	GY22_02035	GY22_03335	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.846
GY22_08745	GY22_01755	GY22_08745	GY22_01755	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
GY22_08745	rbpA	GY22_08745	GY22_16530	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.960
GY22_08745	rpoA	GY22_08745	GY22_05635	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.937
GY22_08745	rpoB	GY22_08745	GY22_05865	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.944
GY22_08745	rpoC	GY22_08745	GY22_05860	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.954
GY22_08745	sigA	GY22_08745	GY22_03335	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.942
dnaG	rpoA	GY22_08890	GY22_05635	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.562
dnaG	rpoB	GY22_08890	GY22_05865	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.712
dnaG	rpoC	GY22_08890	GY22_05860	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.782

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