Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GY22_07910MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)    
Predicted Functional Partners:
GY22_07890
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
GY22_07905
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
narY
Nitrate reductase; With NarZV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
GY22_09245
Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.986
GY22_07900
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
GY22_09215
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.915
GY22_09210
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.850
GY22_09235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.837
GY22_07835
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.827
GY22_04630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.799
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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