STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY22_07970Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
GY22_09770
PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.774
GY22_07350
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.694
GY22_12470
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.658
GY22_03310
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.610
GY22_12110
enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.599
GY22_00015
Fatty oxidation complex subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.579
GY22_04820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.561
GY22_04710
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.551
GY22_16085
NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.549
GY22_07965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.511
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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