Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GY22_07975Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
GY22_14010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
GY22_07510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
GY22_09360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
GY22_16145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
GY22_00765
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
GY22_16745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
GY22_09345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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