Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GY22_08060Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
GY22_08050
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.635
GY22_08055
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.524
GY22_14865
Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.464
GY22_06450
Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GHMP kinase family.
  
  0.462
lysS
lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.457
GY22_08040
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
GY22_08045
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
GY22_00120
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.412
GY22_12150
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.412
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.