Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
GY22_08095Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
GY22_12350
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.947
GY22_11485
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.849
GY22_08090
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.823
GY22_05250
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.733
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.648
GY22_08085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
GY22_08100
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
GY22_08080
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
GY22_09075
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.527
GY22_12635
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.465
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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