Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GY22_08855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)    
Predicted Functional Partners:
GY22_08850
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.938
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.741
GY22_12585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
GY22_16390
Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.637
GY22_07540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
GY22_08775
Glycogen phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.610
GY22_08860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
GY22_05555
1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.574
GY22_04170
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
GY22_04165
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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