Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GY22_09255Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1309 aa)    
Predicted Functional Partners:
GY22_09250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.823
GY22_12365
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.804
GY22_15135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
GY22_12250
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
 0.715
GY22_15625
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
 0.714
GY22_15640
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.700
GY22_10560
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.696
GY22_13440
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.696
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.678
acpS
DNA-binding protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
    
  0.639
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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