Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GY22_00565 | GY22_10085 | GY22_00565 | GY22_10085 | 8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
GY22_00565 | apt | GY22_00565 | GY22_15065 | 8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.823 |
GY22_04970 | GY22_10085 | GY22_04970 | GY22_10085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
GY22_10080 | GY22_10085 | GY22_10080 | GY22_10085 | Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
GY22_10085 | GY22_00565 | GY22_10085 | GY22_00565 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
GY22_10085 | GY22_04970 | GY22_10085 | GY22_04970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
GY22_10085 | GY22_10080 | GY22_10085 | GY22_10080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
GY22_10085 | GY22_10090 | GY22_10085 | GY22_10090 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SNF2 family helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
GY22_10085 | apt | GY22_10085 | GY22_15065 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.504 |
GY22_10090 | GY22_10085 | GY22_10090 | GY22_10085 | SNF2 family helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
apt | GY22_00565 | GY22_15065 | GY22_00565 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
apt | GY22_10085 | GY22_15065 | GY22_10085 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |