STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY22_11495ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
GY22_11500
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.983
GY22_11505
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.975
GY22_11915
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
GY22_11910
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
GY22_11510
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.946
GY22_01075
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.893
GY22_04920
Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.884
GY22_07465
Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.881
GY22_14385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.879
GY22_08180
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.855
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.