STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY22_12825Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)    
Predicted Functional Partners:
GY22_03030
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.914
GY22_16585
Ubiquinol-cytochrome c reductase cytochrome b subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.871
GY22_12100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.843
GY22_01700
DNA double-strand break repair protein Mre11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.836
GY22_02195
Serine/arginine repetitive matrix protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.824
GY22_15095
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.824
GY22_10560
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.809
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.808
GY22_09690
Cyanate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.807
GY22_13440
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.