Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GY22_14535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
GY22_14520
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
GY22_14565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
GY22_14505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
GY22_14540
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.985
GY22_14510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.979
GY22_14515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.979
GY22_14530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.978
GY22_14545
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.945
GY22_14560
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.945
GY22_14525
PAAR motif-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.905
Your Current Organism:
Kocuria polaris
NCBI taxonomy Id: 136273
Other names: DSM 14382, JCM 12076, K. polaris, Kocuria polaris Reddy et al. 2003, MTCC 3702, NBRC 103063, strain CMS 76or
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