STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA90945.1ABC-2 family transporter protein; Function of strongly homologous gene; transporter. (378 aa)    
Predicted Functional Partners:
SCA90946.1
Putative ABC transporter ATP binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.925
SCA91307.1
ABC-type multidrug transport system ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.657
tagH
Teichoic acids export ATP-binding protein TagH with CBM50 domain; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
  
 
 0.657
SCA92941.1
Putative O-antigen export system ATP-binding protein RfbB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.657
SCA93015.1
Putative ABC transporter, ATP-binding transport protein NatA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.657
SCA91321.1
Putative ABC-type multidrug transport system, ATP binding protein, Nod factor export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.654
SCA91897.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
  
 
 0.654
btuD
Vitamin B12 ABC transporter, ATPase component BtuD; Function of strongly homologous gene; transporter.
  
 
 0.654
yxlF
ABC-type transport system, multidrug-family ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.654
ecsA
ABC-type transporter ATP-binding protein EcsA; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.654
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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