Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroE | nadD | LP2241_30106 | LP2241_10111 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.560 |
| aroE | rsfS | LP2241_30106 | LP2241_10113 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.426 |
| aroE | yqeG | LP2241_30106 | LP2241_10108 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative hydrolase, HAD subfamily IIIA (yqeG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.464 |
| aroE | yqeH1 | LP2241_30106 | LP2241_10109 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | GTPase involved in ribosome 30S assembly; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.706 |
| aroE | yqeI | LP2241_30106 | LP2241_10110 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative RNA-binding protein (YqeI); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.542 |
| aroE | yqeK | LP2241_30106 | LP2241_10112 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative hydrolase, HAD superfamily (YqeK); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.573 |
| glnA | yqeG | LP2241_10351 | LP2241_10108 | Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamine synthetase family. | Putative hydrolase, HAD subfamily IIIA (yqeG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.403 |
| nadD | aroE | LP2241_10111 | LP2241_30106 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.560 |
| nadD | rsfS | LP2241_10111 | LP2241_10113 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.832 |
| nadD | yqeG | LP2241_10111 | LP2241_10108 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Putative hydrolase, HAD subfamily IIIA (yqeG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.581 |
| nadD | yqeH1 | LP2241_10111 | LP2241_10109 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | GTPase involved in ribosome 30S assembly; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.595 |
| nadD | yqeI | LP2241_10111 | LP2241_10110 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Putative RNA-binding protein (YqeI); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.791 |
| nadD | yqeK | LP2241_10111 | LP2241_10112 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Putative hydrolase, HAD superfamily (YqeK); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.899 |
| rsfS | aroE | LP2241_10113 | LP2241_30106 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.426 |
| rsfS | nadD | LP2241_10113 | LP2241_10111 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.832 |
| rsfS | yqeG | LP2241_10113 | LP2241_10108 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | Putative hydrolase, HAD subfamily IIIA (yqeG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.462 |
| rsfS | yqeH1 | LP2241_10113 | LP2241_10109 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | GTPase involved in ribosome 30S assembly; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.849 |
| rsfS | yqeI | LP2241_10113 | LP2241_10110 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | Putative RNA-binding protein (YqeI); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.696 |
| rsfS | yqeK | LP2241_10113 | LP2241_10112 | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | Putative hydrolase, HAD superfamily (YqeK); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.833 |
| yqeG | aroE | LP2241_10108 | LP2241_30106 | Putative hydrolase, HAD subfamily IIIA (yqeG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.464 |
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