STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91001.1Cell surface hypothetical protein; No homology to any previously reported sequences. (357 aa)    
Predicted Functional Partners:
SCA91000.1
Conserved hypothetical protein containing WxL domain surface cell wall-binding; Homologs of previously reported genes of unknown function.
 
     0.931
SCA91225.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.755
SCA91230.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
     0.732
SCA92331.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.578
SCA90999.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.527
SCA91841.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.503
pip
Phage infection protein; Function experimentally demonstrated in the studied genus; extrachromosomal origin.
  
    0.478
SCA91002.1
Promiscuous glyoxal/methylglyoxal reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.416
SCA92884.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.400
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.