STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91184.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (223 aa)    
Predicted Functional Partners:
SCA91467.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.744
SCA92395.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.739
SecG
Preprotein translocase subunit SecG (TC 3.A.5.1.1); Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.734
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.724
yvdC
Conserved membrane hypothetical protein, metal-dependent membrane protease domain; Homologs of previously reported genes of unknown function.
 
     0.644
dnaB-2
Putative Helicase loader DnaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.642
SCA92579.1
Putative methyl-accepting chemotaxis-like protein; Homologs of previously reported genes of unknown function.
  
     0.612
yrgA
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.582
pvaA
Lysozyme-like protein; Function of strongly homologous gene; enzyme.
  
     0.571
xerD
Tyrosine recombinase XerD-like; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
  
     0.570
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.