STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywjBConserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0342 family. (105 aa)    
Predicted Functional Partners:
mutS
DNA mismatch repair protein MutS (methyl-directed mismatch repair protein); This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.800
argR
Arginine repressor; Regulates arginine biosynthesis genes.
       0.682
SCA91132.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0342 family.
    
 
 0.610
SCA91363.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 
 0.610
SCA91199.1
Hypothetical protein; No homology to any previously reported sequences.
       0.416
SCA91200.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.416
SCA91201.1
Hypothetical protein; No homology to any previously reported sequences.
       0.416
SCA91202.1
Conserved hypothetical protein (containing a Transposase, Gram-positive bacteria domain); Homologs of previously reported genes of unknown function.
       0.416
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.