STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91322.1ABC-type multidrug transport system permease component; Homologs of previously reported genes of unknown function. (286 aa)    
Predicted Functional Partners:
SCA91321.1
Putative ABC-type multidrug transport system, ATP binding protein, Nod factor export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.971
SCA91319.1
Conserved hypothetical protein (containing a LytTR DNA-binding domain); Homologs of previously reported genes of unknown function.
 
  
 0.651
SCA91080.1
Putative NAD(P)H nitroreductase YdgI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.606
SCA91323.1
Putative membrane anchored protein in TolA-TolQ-TolR complex (TolA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.579
spy0809
Probable NAD(P)H nitroreductase Spy0809; Function of strongly homologous gene; enzyme.
  
  
 0.550
yvdC
Conserved membrane hypothetical protein, metal-dependent membrane protease domain; Homologs of previously reported genes of unknown function.
  
  
 0.550
SCA92773.1
Putative nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the flavin oxidoreductase frp family.
  
  
 0.550
yxlF
ABC-type transport system, multidrug-family ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.485
SCA91320.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.474
SCA91191.1
Conserved hypothetical protein (containing a LytTR DNA-binding domain); Homologs of previously reported genes of unknown function.
 
  
 0.448
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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