STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91353.1Putative uncharacterized HTH-type transcriptional regulator TTE0211; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (280 aa)    
Predicted Functional Partners:
busR
Protein of unknown function; No homology to any previously reported sequences.
  
   
 0.643
SCA91354.1
Hypothetical protein; Doubtful CDS.
       0.588
SCA91355.1
Putative 6-phosphogluconate dehydrogenase(NADP(+)-dependent, decarboxylating) protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.541
SCA91356.1
Putative PTS system, mannose/fructose/sorbose IIC component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.455
SCA91357.1
Putative PTS system, mannose/fructose/sorbose IID component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.451
murQ
N-acetylmuramic acid 6-phosphate etherase 2; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.409
SCA91358.1
Putative PTS system, mannose/fructose/sorbose IIB component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.408
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.