STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91364.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (100 aa)    
Predicted Functional Partners:
SCA91363.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.854
SCA92462.1
Phosphotransferase enzyme family protein; Homologs of previously reported genes of unknown function.
  
     0.649
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
    0.613
SCA91548.1
Putative xylanase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.513
SCA92846.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0223 family.
 
   
 0.511
SCA92958.1
Putative ribosomal RNA small subunit methyltransferase D (RsmD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.479
yjjG
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0374 family.
  
     0.422
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.