STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
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SCA91366.1Putative RNA/thiamine triphosphatase(yjbK); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (196 aa)    
Predicted Functional Partners:
ybbR
Conserved hypothetical protein, YbbR-like domain-containing; Homologs of previously reported genes of unknown function.
  
     0.691
ynbE
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.674
SCA92629.1
Putative Adenine-specific methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.674
yqjB
Conserved membrane hypothetical protein (containing a Colicin V production, CvpA domain); Homologs of previously reported genes of unknown function.
  
     0.670
yvlB
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.659
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.651
ppnK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.649
relP
GTP pyrophosphokinase ((p)ppGpp synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.602
yjbB
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.589
recU
Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.568
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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