STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBAryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (377 aa)    
Predicted Functional Partners:
adh2
Aldehyde-alcohol dehydrogenase 2 (Includes: Alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.956
csoR
Putative copper-sensing transcriptional repressor CsoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.712
SCA90992.1
Putative Acetyl esterase / CE1, similar to LACPI-0155 from L. piscium MKFS47; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.602
xynC
Acetyl esterase / CE1, similar to LACPI-0697 from L. piscium MKFS47; Function of strongly homologous gene; enzyme.
  
 
 0.602
SCA91547.1
Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.602
SCA91655.1
Putative carbohydrate esterase / CE1, similar to LACPI-0857 from L. piscium MKFS47; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.602
xynC-2
Putative tributyrin esterase; Function of strongly homologous gene; enzyme.
  
 
 0.602
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.563
SCA91399.1
Putative metallo-hydrolase/oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.487
gloA
Lactoylglutathione lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.482
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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