STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91421.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0398 family. (176 aa)    
Predicted Functional Partners:
SCA91946.1
Conserved hypothetical protein, (TPR-repeat-containing protein); Homologs of previously reported genes of unknown function.
  
     0.741
SCA92629.1
Putative Adenine-specific methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.697
ecsB
Putative bacterial ABC exoprotein transporter, permease protein EcsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.671
prsA
Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
  
    0.647
ltaS
Lipoteichoic acid synthase 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.615
recU
Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
 
  
 0.579
epsL
Transcriptional regulator, LytR family; Function of strongly homologous gene; regulator.
  
     0.570
SCA92525.1
Protein SprT-like; Function of strongly homologous gene; enzyme; Belongs to the SprT family.
  
     0.566
divIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.530
SCA92956.1
Putative exported degradative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.487
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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