STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91461.1Amino acid/polyamine transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (614 aa)    
Predicted Functional Partners:
apu
Putative Amylopullulanase (Includes: Alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.609
gtfA
Sucrose phosphorylase / GH13, similar to LACPI-1289 from L. piscium MKFS47; Function of strongly homologous gene; enzyme.
   
 0.609
mdxD
Neopullulanase / CBM34, GH13, similar to LACPI-1399 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.609
dexB
Glucan 1,6-alpha-glucosidase / GH13, similar to LACPI-1446 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.609
malL
Oligo-1,6-glucosidase / GH13, similar to LACPI-1484 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.609
treA
trehalose-6-P hydrolase / GH13, similar to LACPI-1657 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.609
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
  
 0.494
SCA91460.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.476
adh2
Aldehyde-alcohol dehydrogenase 2 (Includes: Alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.471
mprF
Putative lysylphosphatidylglycerol synthetase/glycosyltransferase; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
    0.426
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.